Example — Discovery study¶
Category: Big (AI agent) · Script: examples/big/03_discovery_study.py
Agent picks the best curated MAPK model.
How to run¶
pip install -e "src/praisonai-bio"
export OPENAI_API_KEY=sk-...
python examples/big/03_discovery_study.py
Needs: Internet + OpenAI API key.
Tested output¶
Live capture from ./scripts/capture_example_outputs.sh.
Click to view full output
Here are some of the best curated MAPK models for cell signalling:
1. **[Sarma2012 - Oscillations in MAPK cascade (S2)](https://www.biomodels.org/BIOMD0000000442)**
- **ID:** BIOMD0000000442
- **Submitter:** Uddipan Sarma
- **Submission Date:** December 19, 2011
2. **[Neves2008 - Role of cell shape and size in controlling intracellular signalling](https://www.biomodels.org/BIOMD0000000182)**
- **ID:** BIOMD0000000182
- **Submitter:** Harish Dharuri
- **Submission Date:** August 14, 2008
3. **[Hornberg2005 - MAPK signalling](https://www.biomodels.org/BIOMD0000000667)**
- **ID:** BIOMD0000000667
- **Submitter:** Vijayalakshmi Chelliah
- **Submission Date:** April 28, 2009
4. **[Pappalardo2016 - PI3K/AKT and MAPK Signaling Pathways in Melanoma Cancer](https://www.biomodels.org/BIOMD0000000666)**
- **ID:** BIOMD0000000666
- **Submitter:** Francesco Pappalardo
- **Submission Date:** September 19, 2016
5. **[Shin2016 - Unveiling Hidden Dynamics of Hippo Signalling](https://www.biomodels.org/BIOMD0000000832)**
- **ID:** BIOMD0000000832
- **Submitter:** Johannes Meyer
- **Submission Date:** September 25, 2019
These models are all curated and provide various perspectives on MAPK cell signalling mechanisms. You can explore them further via the provided links.