Example — Glycolysis demo¶
Category: Big (AI agent) · Script: examples/big/04_glycolysis_demo.py
Summarise and simulate BIOMD0000000206 in one agent run.
How to run¶
pip install -e "src/praisonai-bio"
export OPENAI_API_KEY=sk-...
python examples/big/04_glycolysis_demo.py
Needs: Internet + OpenAI API key + BASICO for simulation.
Tested output¶
Live capture from ./scripts/capture_example_outputs.sh.
Click to view full output
### Summary of Model BIOMD0000000206
The model **BIOMD0000000206**, titled **Wolf2000_Glycolytic_Oscillations**, contains the following elements:
- **Species:** 9
- **Reactions:** 11
- **Compartments:** 1
- **Parameters:** 18
This model captures the dynamics of glycolytic oscillations in biological systems.
### Simulation Attempts
I attempted to simulate the model, but there was an issue unloading the model for simulation. Therefore, the simulation did not execute successfully.
Would you like me to try running the simulation again or perform any other actions?